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About Team Gojobori Database

The Team Gojobori aimed at grasping the diversity of microorganisms and their changes in the coastal areas of Tohoku sea, where the huge earthquake and tsunami hit. They developed a method to monitor relationships between microbial flora and the environment by comprehensive analysis of metagenomic DNA.
In this database, time series data sampled from Sendai Bay (a regional coast in Tohoku area), A-line (a offshore in Tohoku area) etc from 2012 to 2016 are stored. In addition to the nucleotide sequences, related information such as environmental information, analysis methods etc. are included in the database. Furthermore, microbial community information of each sample calculated from the sequencing analysis can also be browsed as graphical images.

List of data

  • Nucleotide sequence data (Sendai Bay, A-line, Ofunato Bay)
  • Physical and biological information at each sampling spot for comparison of environment.
  • Methods (DNA extraction, NGS sequencing, etc)
  • Graphical representations of various analysis data, including microbial community analysis.
  • Various search functions using the stored database.
Team Gojobori
Data

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